PALADIN, LISANNA
PALADIN, LISANNA
Dipartimento di Scienze Biomediche - DSB
A novel approach to investigate the evolution of structured tandem repeat protein families by exon duplication
2020 Paladin, L.; Necci, M.; Piovesan, D.; Mier, P.; Andrade-Navarro, M. A.; Tosatto, S. C. E.
Comparison of protein repeat classifications based on structure and sequence families
2015 Paladin, Lisanna; Tosatto, Silvio
Computational characterization of tandem repeat and non-globular proteins
2018 Paladin, Lisanna
Critical assessment of protein intrinsic disorder prediction
2021 Necci, M.; Piovesan, D.; Hoque, M. T.; Walsh, I.; Iqbal, S.; Vendruscolo, M.; Sormanni, P.; Wang, C.; Raimondi, D.; Sharma, R.; Zhou, Y.; Litfin, T.; Galzitskaya, O. V.; Lobanov, M. Y.; Vranken, W.; Wallner, B.; Mirabello, C.; Malhis, N.; Dosztanyi, Z.; Erdos, G.; Meszaros, B.; Gao, J.; Wang, K.; Hu, G.; Wu, Z.; Sharma, A.; Hanson, J.; Paliwal, K.; Callebaut, I.; Bitard-Feildel, T.; Orlando, G.; Peng, Z.; Xu, J.; Wang, S.; Jones, D. T.; Cozzetto, D.; Meng, F.; Yan, J.; Gsponer, J.; Cheng, J.; Wu, T.; Kurgan, L.; Promponas, V. J.; Tamana, S.; Marino-Buslje, C.; Martinez-Perez, E.; Chasapi, A.; Ouzounis, C.; Dunker, A. K.; Kajava, A. V.; Leclercq, J. Y.; Aykac-Fas, B.; Lambrughi, M.; Maiani, E.; Papaleo, E.; Chemes, L. B.; Alvarez, L.; Gonzalez-Foutel, N. S.; Iglesias, V.; Pujols, J.; Ventura, S.; Palopoli, N.; Benitez, G. I.; Parisi, G.; Bassot, C.; Elofsson, A.; Govindarajan, S.; Lamb, J.; Salvatore, M.; Hatos, A.; Monzon, A. M.; Bevilacqua, M.; Micetic, I.; Minervini, G.; Paladin, L.; Quaglia, F.; Leonardi, E.; Davey, N.; Horvath, T.; Kovacs, O. P.; Murvai, N.; Pancsa, R.; Schad, E.; Szabo, B.; Tantos, A.; Macedo-Ribeiro, S.; Manso, J. A.; Pereira, P. J. B.; Davidovic, R.; Veljkovic, N.; Hajdu-Soltesz, B.; Pajkos, M.; Szaniszlo, T.; Guharoy, M.; Lazar, T.; Macossay-Castillo, M.; Tompa, P.; Tosatto, S. C. E.
Disentangling the complexity of low complexity proteins
2019 Mier, Pablo; Paladin, Lisanna; Tamana, Stella; Petrosian, Sophia; Hajdu-Soltész, Borbála; Urbanek, Annika; Gruca, Aleksandra; Plewczynski, Dariusz; Grynberg, Marcin; Bernadó, Pau; Gáspári, Zoltán; Ouzounis, Christos A; Promponas, Vasilis J; Kajava, Andrey V; Hancock, John M; Tosatto, Silvio C E; Dosztanyi, Zsuzsanna; Andrade-Navarro, Miguel A
DisProt: intrinsic protein disorder annotation in 2020
2019 Hatos, András; Hajdu-Soltész, Borbála; Monzon, Alexander M; Palopoli, Nicolas; Álvarez, Lucía; Aykac-Fas, Burcu; Bassot, Claudio; Benítez, Guillermo I; Bevilacqua, Martina; Chasapi, Anastasia; Chemes, Lucia; Davey, Norman E; Davidović, Radoslav; Dunker, A Keith; Elofsson, Arne; Gobeill, Julien; Foutel, Nicolás S González; Sudha, Govindarajan; Guharoy, Mainak; Horvath, Tamas; Iglesias, Valentin; Kajava, Andrey V; Kovacs, Orsolya P; Lamb, John; Lambrughi, Matteo; Lazar, Tamas; Leclercq, Jeremy Y; Leonardi, Emanuela; Macedo-Ribeiro, Sandra; Macossay-Castillo, Mauricio; Maiani, Emiliano; Manso, José A; Marino-Buslje, Cristina; Martínez-Pérez, Elizabeth; Mészáros, Bálint; Mičetić, Ivan; Minervini, Giovanni; Murvai, Nikoletta; Necci, Marco; Ouzounis, Christos A; Pajkos, Mátyás; Paladin, Lisanna; Pancsa, Rita; Papaleo, Elena; Parisi, Gustavo; Pasche, Emilie; Barbosa Pereira, Pedro J; Promponas, Vasilis J; Pujols, Jordi; Quaglia, Federica; Ruch, Patrick; Salvatore, Marco; Schad, Eva; Szabo, Beata; Szaniszló, Tamás; Tamana, Stella; Tantos, Agnes; Veljkovic, Nevena; Ventura, Salvador; Vranken, Wim; Dosztányi, Zsuzsanna; Tompa, Peter; Tosatto, Silvio C E; Piovesan, Damiano
Identification of repetitive units in protein structures with ReUPred
2016 Hirsh, Layla; Piovesan, Damiano; Paladin, Lisanna; Tosatto, Silvio
In silico characterization of human prion-like proteins: Beyond neurological diseases
2019 IGLESIAS MAS, JUAN VALENTIN; Paladin, L.; Juan-Blanco, T.; Pallares, I.; Aloy, P.; Tosatto, S. C. E.; Ventura, S.
MobiDB 3.0: More annotations for intrinsic disorder, conformational diversity and interactions in proteins
2018 Piovesan, Damiano; Tabaro, Francesco; Paladin, Lisanna; Necci, Marco; Micetic, Ivan; Camilloni, Carlo; Davey, Norman; Dosztányi, Zsuzsanna; Mészáros, Bálint; Monzon, Alexander M; Parisi, Gustavo; Schad, Eva; Sormanni, Pietro; Tompa, Peter; Vendruscolo, Michele; Vranken, Wim F; Tosatto, Silvio C. E.
Pfam: The protein families database in 2021
2021 Mistry, Jaina; Chuguransky, Sara; Williams, Lowri; Qureshi, Matloob; Salazar, Gustavo A; Sonnhammer, Erik L L; Tosatto, Silvio C E; Paladin, Lisanna; Raj, Shriya; Richardson, Lorna J; Finn, Robert D; Bateman, Alex
PhytoTypeDB: a database of plant protein inter-cultivar variability and function
2018 Necci, Marco; Piovesan, Damiano; Micheletti, Diego; Paladin, Lisanna; Cestaro, Alessandro; Tosatto, Silvio C E
PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins
2020 Jarnot, P.; Ziemska-Legiecka, J.; Dobson, L.; Merski, M.; Mier, P.; Andrade-Navarro, M. A.; Hancock, J. M.; Dosztanyi, Z.; Paladin, L.; Necci, M.; Piovesan, D.; Tosatto, S. C. E.; Promponas, V. J.; Grynberg, M.; Gruca, A.
ProSeqViewer: an interactive, responsive and efficient TypeScript library for visualization of sequences and alignments in web applications
2021 Bevilacqua, Martina; Paladin, Lisanna; Tosatto, Silvio C E; Piovesan, Damiano
RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures
2017 Paladin, Lisanna; Hirsh, Layla; Piovesan, Damiano; Andrade Navarro, Miguel A; Kajava, Andrey V; Tosatto, Silvio
RepeatsDB in 2021: improved data and extended classification for protein tandem repeat structures
2021 Paladin, Lisanna; Bevilacqua, Martina; Errigo, Sara; Piovesan, Damiano; Mičetić, Ivan; Necci, Marco; Monzon, Alexander Miguel; Fabre, Maria Laura; Lopez, Jose Luis; Nilsson, Juliet F; Rios, Javier; Menna, Pablo Lorenzano; Cabrera, Maia; Buitron, Martin Gonzalez; Kulik, Mariane Gonçalves; Fernandez-Alberti, Sebastian; Fornasari, Maria Silvina; Parisi, Gustavo; Lagares, Antonio; Hirsh, Layla; Andrade-Navarro, Miguel A; Kajava, Andrey V; Tosatto, Silvio C E
RepeatsDB-lite: A web server for unit annotation of tandem repeat proteins
2018 Hirsh, Layla; Paladin, Lisanna; Piovesan, Damiano; Tosatto, Silvio C. E.
SODA: prediction of protein solubility from disorder and aggregation propensity
2017 Paladin, Lisanna; Piovesan, Damiano; Tosatto, Silvio
Structural in silico dissection of the collagen v interactome to identify genotype-phenotype correlations in classic Ehlers-Danlos Syndrome (EDS)
2015 Paladin, Lisanna; Tosatto, Silvio; Minervini, Giovanni
The Feature-Viewer: A visualization tool for positional annotations on a sequence
2020 Paladin, L.; Schaeffer, M.; Gaudet, P.; Zahn-Zabal, M.; Michel, P. -A.; Piovesan, D.; Tosatto, S. C. E.; Bairoch, A.
The Pfam protein families database in 2019
2019 El-Gebali, Sara; Mistry, Jaina; Bateman, Alex; Eddy, Sean R.; Luciani, Aurélien; Potter, Simon C.; Qureshi, Matloob; Richardson, Lorna J.; Salazar, Gustavo A.; Smart, Alfredo; Sonnhammer, Erik L L; Hirsh, Layla; Paladin, Lisanna; Piovesan, Damiano; Tosatto, Silvio C E; Finn, Robert D.