WALSH, IAN THOMAS
WALSH, IAN THOMAS
Dipartimento di Scienze Biomediche - DSB
Analysis and consensus of currently available intrinsic protein disorder annotation sources in the MobiDB database.
2013 DI DOMENICO, Tomas; Walsh, IAN THOMAS; Tosatto, Silvio
Bluues Server: electrostatic properties of wild-type and mutated protein structures.
2012 Walsh, IAN THOMAS; Minervini, G; Corazza, A; Esposito, G; Tosatto, Silvio; Fogolari, F.
Comprehensive large-scale assessment of intrinsic protein disorder
2015 Walsh, IAN THOMAS; Giollo, Manuel; DI DOMENICO, Tomas; Ferrari, Carlo; O., Zimmermann; Tosatto, Silvio
Correct machine learning on protein sequences: A peer-reviewing perspective
2016 Walsh, IAN THOMAS; Pollastri, Gianluca; Tosatto, Silvio
Critical assessment of protein intrinsic disorder prediction
2021 Necci, M.; Piovesan, D.; Hoque, M. T.; Walsh, I.; Iqbal, S.; Vendruscolo, M.; Sormanni, P.; Wang, C.; Raimondi, D.; Sharma, R.; Zhou, Y.; Litfin, T.; Galzitskaya, O. V.; Lobanov, M. Y.; Vranken, W.; Wallner, B.; Mirabello, C.; Malhis, N.; Dosztanyi, Z.; Erdos, G.; Meszaros, B.; Gao, J.; Wang, K.; Hu, G.; Wu, Z.; Sharma, A.; Hanson, J.; Paliwal, K.; Callebaut, I.; Bitard-Feildel, T.; Orlando, G.; Peng, Z.; Xu, J.; Wang, S.; Jones, D. T.; Cozzetto, D.; Meng, F.; Yan, J.; Gsponer, J.; Cheng, J.; Wu, T.; Kurgan, L.; Promponas, V. J.; Tamana, S.; Marino-Buslje, C.; Martinez-Perez, E.; Chasapi, A.; Ouzounis, C.; Dunker, A. K.; Kajava, A. V.; Leclercq, J. Y.; Aykac-Fas, B.; Lambrughi, M.; Maiani, E.; Papaleo, E.; Chemes, L. B.; Alvarez, L.; Gonzalez-Foutel, N. S.; Iglesias, V.; Pujols, J.; Ventura, S.; Palopoli, N.; Benitez, G. I.; Parisi, G.; Bassot, C.; Elofsson, A.; Govindarajan, S.; Lamb, J.; Salvatore, M.; Hatos, A.; Monzon, A. M.; Bevilacqua, M.; Micetic, I.; Minervini, G.; Paladin, L.; Quaglia, F.; Leonardi, E.; Davey, N.; Horvath, T.; Kovacs, O. P.; Murvai, N.; Pancsa, R.; Schad, E.; Szabo, B.; Tantos, A.; Macedo-Ribeiro, S.; Manso, J. A.; Pereira, P. J. B.; Davidovic, R.; Veljkovic, N.; Hajdu-Soltesz, B.; Pajkos, M.; Szaniszlo, T.; Guharoy, M.; Lazar, T.; Macossay-Castillo, M.; Tompa, P.; Tosatto, S. C. E.
CSpritz: accurate prediction of protein disorder segments with annotation for homology, secondary structure and linear motifs
2011 Walsh, IAN THOMAS; Martin, Ajm; DI DOMENICO, T; Vullo, A; Pollastri, G; Tosatto, Silvio
ESpritz: accurate and fast prediction of protein disorder
2012 Walsh, I.; Martin, A. J.; Di Domenico, T.; Tosatto, S. C. E.
Experimentally determined long intrinsically disordered protein regions are now abundant in the protein data bank
2020 Monzon, A. M.; Necci, M.; Quaglia, F.; Walsh, I.; Zanotti, G.; Piovesan, D.; Tosatto, S. C. E.
FELLS: fast estimator of latent local structure
2017 Piovesan, Damiano; Walsh, IAN THOMAS; Minervini, Giovanni; Tosatto, Silvio
Individual Participant Data Network Meta-Analysis of Neoadjuvant Chemotherapy or Chemoradiotherapy in Esophageal or Gastroesophageal Junction Carcinoma
2023 Faron, M.; Cheugoua-Zanetsie, M.; Tierney, J.; Thirion, P.; Nankivell, M.; Winter, K.; Yang, H.; Shapiro, J.; Vernerey, D.; Smithers, B. M.; Walsh, T.; Piessen, G.; Nilsson, M.; Boonstra, J.; Ychou, M.; Law, S.; Cunningham, D.; De Vathaire, F.; Stahl, M.; Urba, S.; Valmasoni, M.; Williaume, D.; Thomas, J.; Lordick, F.; Tepper, J.; Roth, J.; Gebski, V.; Burmeister, B.; Paoletti, X.; Van Sandick, J.; Fu, J.; Pignon, J. -P.; Ducreux, M.; Michiels, S.
MOBI: a web server to define and visualize structural mobility in NMR protein ensembles
2010 Martin, Aj; Walsh, IAN THOMAS; Tosatto, Silvio
MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins
2015 Potenza, Emilio; DI DOMENICO, Tomas; Walsh, IAN THOMAS; Tosatto, Silvio
MobiDB: a comprehensive database of intrinsic protein disorder annotations.
2012 Di Domenico, T; Walsh, IAN THOMAS; MARTIN MARTIN, ALBERTO JESUS; Tosatto, Silvio
NeEMO: A method using residue interaction networks to improve prediction of protein stability upon mutation
2014 Giollo, Manuel; Martin, Alberto J. M.; Walsh, IAN THOMAS; Ferrari, Carlo; Tosatto, Silvio
PANADA: protein association network annotation, determination and analysis.
2013 MARTIN MARTIN, ALBERTO JESUS; Walsh, IAN THOMAS; DI DOMENICO, Tomas; Micetic, Ivan; Tosatto, Silvio
PASTA 2.0: an improved server for protein aggregation prediction
2014 Walsh, IAN THOMAS; Seno, Flavio; Tosatto, Silvio; Trovato, Antonio
RAPHAEL: Recognition, periodicity and insertion assignment of solenoid protein structures.
2012 Walsh, IAN THOMAS; Sirocco, Fg; Minervini, G; Di Domenico, T; Ferrari, Carlo; Tosatto, Silvio
RepeatsDB: a database of tandem repeat protein structures.
2014 DI DOMENICO, Tomas; Potenza, Emilio; Walsh, IAN THOMAS; Parra, Rg; Giollo, Manuel; Minervini, G; Piovesan, Damiano; Ihsan, A; Ferrari, Carlo; Kajava, Av; Tosatto, Silvio
RING: Networking interacting residues, evolutionary information and energetics in protein structures
2011 Ajm, Martin; Vidotto, M.; Boscariol, FILIPPO LUIGI; DI DOMENICO, T.; Walsh, I.; Tosatto, S. C. E.
RUBI: rapid proteomic-scale prediction of lysine ubiquitination and factors influencing predictor performance
2014 Walsh, IAN THOMAS; DI DOMENICO, Tomas; Tosatto, Silvio