ZAMPIERI, GUIDO
ZAMPIERI, GUIDO
Dipartimento di Biologia - DiBio
A mechanism-aware and multiomic machine-learning pipeline characterizes yeast cell growth
2020 Culley, Christopher; Vijayakumar, Supreeta; Zampieri, Guido; Angione, Claudio
A poly-omics machine-learning method to predict metabolite production in CHO cells
2017 Zampieri, Guido; Coggins, Macauley; Valle, Giorgio; Angione, Claudio
A unified compendium of prokaryotic and viral genomes from over 300 anaerobic digestion microbiomes
2024 Centurion, Victor Borin; Rossi, Alessandro; Orellana, Esteban; Ghiotto, Gabriele; Kakuk, Balázs; Morlino, Maria Silvia; Basile, Arianna; Zampieri, Guido; Treu, Laura; Campanaro, Stefano
Adaptation of Anaerobic Digestion Microbial Communities to High Ammonium Levels: Insights from Strain-Resolved Metagenomics
2023 Bucci, Luca; Ghiotto, Gabriele; Zampieri, Guido; Raga, Roberto; Favaro, Lorenzo; Treu, Laura; Campanaro, Stefano
Classification of bioactive peptides: A systematic benchmark of models and encodings
2024 Bizzotto, E.; Zampieri, G.; Treu, L.; Filannino, P.; Di Cagno, R.; Campanaro, S.
Clinical stratification improves the diagnostic accuracy of small omics datasets within machine learning and genome-scale metabolic modelling methods
2022 Magazzù, Giuseppe; Zampieri, Guido; Angione, Claudio
Cupriavidus necator as a platform for polyhydroxyalkanoate production: An overview of strains, metabolism, and modeling approaches
2023 Morlino, M. S.; Serna Garcia, R.; Savio, F.; Zampieri, G.; Morosinotto, T.; Treu, L.; Campanaro, S.
Exploring full-scale biogas inoculants to boost biogas production from different organic waste streams
2022 Agostini, Sara; Zampieri, Guido; Müller, Bettina; Sibilla, Fabrizio; Campanaro, Stefano; Treu, Laura; Favaro, Lorenzo
FEEDS, the Food wastE biopEptiDe claSsifier: From microbial genomes and substrates to biopeptides function
2024 Centurion, V. B.; Bizzotto, E.; Tonini, S.; Filannino, P.; Di Cagno, R.; Zampieri, G.; Campanaro, S.
Genome Sequencing Variations in the Octodon degus, an Unconventional Natural Model of Aging and Alzheimer's Disease
2022 Hurley, Michael J.; Urra, Claudio; Garduno, B. Maximiliano; Bruno, Agostino; Kimbell, Allison; Wilkinson, Brent; Marino-Buslje, Cristina; Ezquer, Marcelo; Ezquer, Fernando; Aburto, Pedro F.; Poulin, Elie; Vasquez, Rodrigo A.; Deacon, Robert; Avila, Ariel; Altimiras, Francisco; Whitney Vanderklish, Peter; Zampieri, Guido; Angione, Claudio; Constantino, Gabriele; Holmes, Todd C.; Coba, Marcelo P.; Xu, Xiangmin; Cogram, Patricia
Genome‐scale metabolic modelling of SARS‐CoV‐2 in cancer cells reveals an increased shift to glycolytic energy production
2021 Yaneske, Elisabeth; Zampieri, Guido; Bertoldi, Loris; Benvenuto, Giuseppe; Angione, Claudio
Integrating genome-scale metabolic modelling and transfer learning for human gene regulatory network reconstruction
2022 Pio, Gianvito; Mignone, Paolo; Magazzù, Giuseppe; Zampieri, Guido; Ceci, Michelangelo; Angione, Claudio
Integrating metagenomic binning with flux balance analysis to unravel syntrophies in anaerobic CO2 methanation
2022 De Bernardini, N.; Basile, A.; Zampieri, G.; Kovalovszki, A.; De Diego Diaz, B.; Offer, E.; Wongfaed, N.; Angelidaki, I.; Kougias, P. G.; Campanaro, S.; Treu, L.
KEMET – A python tool for KEGG Module evaluation and microbial genome annotation expansion
2022 Palu, M.; Basile, A.; Zampieri, G.; Treu, L.; Rossi, A.; Morlino, M. S.; Campanaro, S.
Machine and deep learning meet genome-scale metabolic modeling
2019 Zampieri, Guido; Vijayakumar, Supreeta; Yaneske, Elisabeth; Angione, Claudio
Metapresence: a tool for accurate species detection in metagenomics based on the genome-wide distribution of mapping reads
2024 Sanguineti, D.; Zampieri, G.; Treu, L.; Campanaro, S.
Metatranscriptomics-guided genome-scale metabolic modeling of microbial communities
2023 Zampieri, Guido; Campanaro, Stefano; Angione, Claudio; Treu, Laura
MICROPHERRET: MICRObial PHEnotypic tRait ClassifieR using Machine lEarning Techniques
2024 Bizzotto, E.; Fraulini, S.; Zampieri, G.; Orellana, E.; Treu, L.; Campanaro, S.
Modeling Customer Experience in a Contact Center through Process Log Mining
2021 Fu, Teng; Zampieri, Guido; Hodgson, David; Angione, Claudio; Zeng, Yifeng
Modelling of microbial interactions in anaerobic digestion: from black to glass box
2023 Basile, A.; Zampieri, G.; Kovalovszki, A.; Karkaria, B.; Treu, L.; Patil, K. R.; Campanaro, S.