COMIN, MATTEO
COMIN, MATTEO
Dipartimento di Ingegneria dell'Informazione - DEI
Predicting VNN resistance in European sea bass using machine learning on high dimensional low sample size data
2026 Faldani, G.; Rossignolo, E.; Signor, E.; Longo, A.; Faggion, S.; Bargelloni, L.; Comin, M.; Pizzi, C.
USTAR-CR: Efficient and Compact Compression of k-Mer Sets Through Colored de Bruijn Graphs
2026 Rossignolo, Enrico; Comin, Matteo
Machine Learning Methods for Phenotype Prediction from High-Dimensional, Low Population Aquaculture Data
2025 Faldani, Giovanni; Rossignolo, Enrico; Signor, Eleonora; Longo, Alessio; Faggion, Sara; Bargelloni, Luca; Comin, Matteo; Pizzi, Cinzia
Covid-19 Pandemic’s Enduring Impact on Urban Mobility: The Case of Free-Floating Bike Sharing in Padova, Italy
2024 Cavattoni, Margherita; Comin, Matteo; Silvestri, Francesco
Enhanced Compression of k-Mer Sets with Counters via de Bruijn Graphs
2024 Rossignolo, Enrico; Comin, Matteo
MISSH: Fast Hashing of Multiple Spaced Seeds
2024 Mian, Eleonora; Petrucci, Enrico; Pizzi, Cinzia; Comin, Matteo
ClassGraph: Improving Metagenomic Read Classification with Overlap Graphs
2023 Cavattoni, Margherita; Comin, Matteo
SPRISS: Approximating Frequent K-mers by Sampling Reads, and Applications
2022 Santoro, Diego; Pellegrina, Leonardo; Comin, Matteo; Vandin, Fabio
Comparison of microbiome samples: methods and computational challenges
2021 Comin, Matteo; Di Camillo, Barbara; Pizzi, Cinzia; Vandin, Fabio
Fast alignment of reads to a variation graph with application to SNP detection
2021 Monsu, Maurilio; Comin, Matteo
K2Mem: Discovering Discriminative K-mers from Sequencing Data for Metagenomic Reads Classification
2021 Storato, D.; Comin, M.
MetaProb 2: Metagenomic Reads Binning Based on Assembly Using Minimizers and K-Mers Statistics
2021 Andreace, Francesco; Pizzi, Cinzia; Comin, Matteo
Special Issue of the 1st International Applied Bioinformatics Conference (iABC'21)
2021 Allmer, Jens; Elloumi, Mourad; Comin, Matteo; Hofestädt, Ralf
Iterative Spaced Seed Hashing: Closing the Gap between Spaced Seed Hashing and k-mer Hashing
2020 Petrucci, E.; Noe, L.; Pizzi, C.; Comin, M.
Benchmarking of alignment-free sequence comparison methods
2019 Zielezinski, Andrzej; Girgis, Hani Z; Bernard, Guillaume; Leimeister, Chris-Andre; Tang, Kujin; Dencker, Thomas; Lau, Anna Katharina; Röhling, Sophie; Choi, Jae Jin; Waterman, Michael S; Comin, Matteo; Kim, Sung-Hou; Vinga, Susana; Almeida, Jonas S; Chan, Cheong Xin; James, Benjamin T; Sun, Fengzhu; Morgenstern, Burkhard; Karlowski, Wojciech M
Better quality score compression through sequence-based quality smoothing
2019 Shibuya, Yoshihiro; Comin, Matteo
Indexing k-mers in linear space for quality value compression
2019 Shibuya, Y.; Comin, M.
MetaCon: unsupervised clustering of metagenomic contigs with probabilistic k-mers statistics and coverage
2019 Qian, Jia; Comin, Matteo
Efficient computation of spaced seed hashing with block indexing
2018 Girotto, S.; Comin, M.; Pizzi, C.
FSH: Fast spaced seed hashing exploiting adjacent hashes
2018 Girotto, Samuele; Comin, Matteo; Pizzi, Cinzia