We outline a general strategy for determining the effective coarse-grained interactions between the amino acids of a protein from the experimentally derived native-state structures, The method is, in principle, free from any adjustable or empirically determined parameters, and it is tested on simple models and compared with other existing approaches. (C) 1998 Wiley-Liss, Inc.
Interaction potentials for protein folding
SENO, FLAVIO;MARITAN, AMOS;
1998
Abstract
We outline a general strategy for determining the effective coarse-grained interactions between the amino acids of a protein from the experimentally derived native-state structures, The method is, in principle, free from any adjustable or empirically determined parameters, and it is tested on simple models and compared with other existing approaches. (C) 1998 Wiley-Liss, Inc.
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